![]() ![]() Sreekumaran Sumner, Susan Subramaniam, Shankar Sud, Manish Fahy, Eoin Cotter, Dawn Azam, Kenan Vadivelu, Ilango Burant, Charles Edison, Arthur Fiehn, Oliver Higashi, Richard Nair, K. Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools Please contact the authors for details about setting up a local-network AnaBench site elsewhere. The prototype of AnaBench, managed by a team at the Université de Montréal, is accessible on-line at. Conclusion AnaBench is an efficient and intuitive interactive bioinformatics environment, which offers scientists application-driven, data-driven and protocol-driven analysis approaches. A CORBA server permits transparent access to a workbench management database, which stores information about the users, their data, as well as the description of all bioinformatics applications that can be launched from the workbench. This flexibility is achieved by employing a three-tier distributed architecture and recent technologies including CORBA middleware, Java, JDBC, and JSP. With new bioinformatics tools published daily, AnaBench permits easy incorporation of additional tools. Our philosophy was to minimize the technical effort not only for the scientist who uses this environment to analyze data, but also for the administrator who manages and maintains the workbench. Results In this paper, we present the design and implementation of AnaBench, an interactive, Web-based bioinformatics Analysis workBench allowing streamlined data analysis. Due to the heterogeneity of bioinformatics tools in usage and data requirements, scientists spend much effort on technical issues including data format, storage and management of input and output, and memorization of numerous parameters and multi-step analysis procedures. ĪnaBench: a Web/CORBA-based workbench for biomolecular sequence analysisīadidi, Elarbi De Sousa, Cristina Lang, B Franz Burger, Gertraudīackground Sequence data analyses such as gene identification, structure modeling or phylogenetic tree inference involve a variety of bioinformatics software tools. All software and services are available via the UCL Bioinformatics Group website at. ![]() We offer a number of additional services to enable computationally scalable execution of our prediction methods these include SOAP and XML-RPC web server access and new HADOOP packages. The new web portal provides a greatly streamlined user interface with a number of new features to allow users to better explore their results. The Workbench unites all of our previously available analysis methods into a single web-based framework. Here, we present the new UCL Bioinformatics Group's PSIPRED Protein Analysis Workbench. Scalable web services for the PSIPRED Protein Analysis Workbench.īuchan, Daniel W A Minneci, Federico Nugent, Tim C O Bryson, Kevin Jones, David T ![]()
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